Dataset from Zenodo · BioTIME

BioTIME 2.0: expanding and improving a database of biodiversity time series

License
CC BY 4.0commercial use allowedLicense text
This license allows commercial use. Usually you must credit the author; read the license for the exact terms.
Formats
TXT, CSV, RDS, SQL
Size
1.3 GB
Updated
Apr 15, 2025

Description

Here we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies in the database, and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R package (BioTIMEr) to facilitate use of the database. We include here: SQL file of the database - biotime v2 sql 15April25.sql RDS file of the query combining raw data with species names - biotime v2 query 15April25.rds csv file for metadata information - biotime v2 metadata 15April25.csv csv file of citations - references biotime v2 15April25.csv text file of BIB text citations - BIB biotime v2 15April25.csv.txt for issue of version 2.0 of the BioTIME database

Description from Zenodo, shortened.

Files (5)

  • TXTBIB_biotime_v2_15April25.csv.txt621 kB
  • CSVbiotime_v2_metadata_15April25.csv2.4 MB
  • CSVreferences_biotime_v2_15April25.csv633 kB
  • RDSbiotime_v2_query_15April25.rds166 MB
  • SQLbiotime_v2_sql_15April25.sql1.1 GB

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