DH{}DataHunter

Skup podataka sa Zenodo · Hall, Michael B.

Mycobacterium genus database

Otvori na Zenodo
Licenca
CC0 1.0dozvoljena komercijalna upotrebaTekst licence
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Formati
GZ, CSV, IDS
Veličina
533 MB
Ažurirano
15. 2. 2024.

Opis

The database is built as a Mycobacterium -specific one. For this database, we used genome updater.sh (v0.6.3; https://github.com/pirovc/genome updater) genome updater.sh -d "refseq" -g "bacteria" -T "g Mycobacterium" -f "genomic.fna.gz" -M "gtdb" -A 1 -m In addition, we added 17 high-quality M. tuberculosis genomes to this collection (from https://doi.org/10.1186/s13059-021-02474-0 - see mtb gramtools lineages.csv for the list of accessions). The mtb.ids file lists the sequence identifiers for those sequences in the database which are M. tuberculosis .

Opis sa Zenodo, skraćen.

Fajlovi (3)

  • GZMycobacterium.rep.fna.gz533 MB
  • CSVmtb_gramtools_lineages.csv437 B
  • IDSmtb.ids114 B

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